Numerical Simulation, An Art of Prediction, Volume 2. Jean-François Sigrist

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the richest countries, agriculture is becoming digital and modeling is a key focus of this change [WAL 18]. David Makowski, an expert in this field at INRA*, explains the objective:

      “Germany, Australia, France, Italy, the United States and the Netherlands are the pioneering countries in the use of numerical modeling in agriculture, recently joined by China. Numerical simulation makes it possible to assess the impact of agricultural practices, soil quality and climate on yields and the environment. The applications are varied and allow farmers, companies and public agencies to estimate the performance of different production methods in different situations. Despite the sometimes significant uncertainty of their simulations, models are frequently used to predict the environmental impact of agriculture by assessing the emissions of particulate matter, greenhouse gases or pollutants due to agricultural practices”.

      Numerical simulations in agronomy have used “mechanistic models” for two to three decades. These allow the functioning of crops to be described by means of equations; these, for instance, represent the production of biomass as a function of solar radiation, or the growth of plants as a function of soil temperature or humidity. Simulations make it possible to account for the physiological and biological dynamics of plants, on the scale of a plot or a set of cultivated lands. They can represent different agricultural practices and help to assess their impact on yields.

      An example of modeling applicable to biological phenomena? The interaction model between hosts and biological control auxiliaries. It describes how biological populations, such as predators and their prey (aphids and ladybirds for example), evolve in an ecosystem. For example, it explains the development cycles of many species (animal, plant, etc.) in many environments, such as the marine phytoplankton (Figure 1.7).

      The model consists of two differential equations, proposed independently by two mathematicians, the Austrian Alfred-James Lotka (1880–1949) and the Italian Vito Volterra (1860–1940), in 1925–1926. These equations are written as:

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      Figure 1.7. Satellite image showing algae growth in a North Atlantic region (source: www.nasa.gov). For a color version of this figure, see www.iste.co.uk/sigrist/simulation2.zip

      COMMENT ON FIGURE 1.7.– In the waters of the North Atlantic, a large amount of phytoplankton, microscopic algae that play a role in the food chain of the marine ecosystem and contribute to the ocean carbon cycle, develops each spring and fall. The image is a photograph taken by NASA’s “Suomi” satellite on September 23, 2015. Blue spirals represent high concentrations of algae, waters loaded with microscopic creatures that contribute to the production of part of the planet’s oxygen.

      The Lotka–Volterra equations have as unknown the populations of the competing species, the coefficients describe their survival and mortality rates. They predict a cyclical evolution of populations that is consistent with the observations (Figure 1.8). Many other equation-based models are available for studies of organic and agricultural systems. In recent years, data-based simulations have been developed to complement these models – nowadays, they use methods such as automatic learning techniques, discussed in Chapter 4 of the first volume. Statistical models are based on an adjustment of equations to data and allow an empirical relationship between different quantities to be established.

      Figure 1.8. Typical evolution of the prey/predator populations as predicted by the Lotka-Volterra equations

      Satellites, drones (Figure 1.9), sensors, field surveys: statistical models are based on a large number of data and it is the variety and diversity of the latter that gives credibility to predictions. Data used in statistical models are diverse: they describe the crop environment (e.g. topography and meteorology), farmers’ practices (e.g. frequency of watering or spreading), animal species behavior or plant species growth.

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      Figure 1.9. Agricultural drones are used to monitor crops and collect useful data to develop or validate certain simulations

       (source: © Christophe Maitre/INRA/ www.mediatheque.inra.fr/ )

      The models of each family complement each other, each providing information whose multimodel analysis makes it possible to identify trends [MAK 15]:

      Simulations involve equations coupling different scales (plant, plot, farm or agricultural region). They require a large amount of data and still require very long computational times. Despite these current limitations, which artificial intelligence algorithms help to push back, modeling in agriculture is becoming more widespread and a tool for scientific debate and political decisions. Let us listen to the researchers involved in the development of models through a few examples.

      Farmers, political and economic decision makers, and consumers shape the landscape of agricultural practices to varying degrees, each acting at its own level: by guiding a continental agricultural policy, by deciding to invest in a new machine tool, or simply by doing one’s shopping. Different agents, actors and practices influence it and the behaviors of each have societal and environmental consequences.

      Some agricultural practices have potentially negative impacts on climate and biodiversity, for example [BEL 19]. The disappearance of many insect species is attributed to the destruction of their habitat by intensive agriculture and their poisoning by the widespread use of pesticides [HAL 17, SAN 19]. How can these harmful effects be anticipated and limited? How can climate change be taken into account in current and future practices [BAS 14]? What is the best combination of agricultural practices that makes it possible to produce while guaranteeing a country’s food sovereignty? How can we legislate and cultivate for the benefit of the greatest number of people? Hélène Raynal, researcher at INRA and project manager of a digital platform dedicated to agrosystems [BER 13] provides an initial answer:

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