used for genotyping of millet ...Table 12.2 List of GBS‐based QTL mapping studies in millet crops.Table 12.3 Details of efforts performed for whole‐genome resequencing and r...Table 12.4 Summarized millet genome assembly statistics.Table 12.5 The list of GBS‐based GWAS studies in millets.11 Chapter 13Table 13.1 Whole‐genome resequencing studies in pigeon pea.Table 13.2 List of high‐density genotyping platforms developed for pigeon p...Table 13.3 High‐density linkage maps generated in pigeon pea by using the r...Table 13.4 List of significant QTLs identified using GBS and high‐density S...
12 Chapter 14Table 14.1 Studies on linkage and QTL mapping in sugarcane through GBS‐base...Table 14.2 Studies on GWAS for various traits in sugarcane using GBS marker...
13 Chapter 16Table 16.1 List of GBS‐based QTL in conducted in oilseed crops.Table 16.2 List of GBS‐based GWAS studies in oilseed crops.
List of Illustrations
1 Chapter 1Figure 1.1 An example of GBS and GBS data analysis workflow for identificati...Figure 1.2 Steps in KASP reaction: (a) annealing: allele‐specific primer bin...
2 Chapter 2Figure 2.1 A pipeline for SNP discovery (S1–S10 are different diverse access...Figure 2.2 A schematic representation of different SNP genotyping technologi...Figure 2.3 Illustration of various steps involved in the generation of RAD‐b...Figure 2.4 Schematic illustration of work‐flow in a MALDI‐TOF MS
3 Chapter 3Figure 3.1 Diagrammatic representation of various high‐throughput‐sequencing...Figure 3.2 Genome‐wide association studies (GWAS) in rice seedling for salt‐...
4 Chapter 4Figure 4.1 Steps involved in bulked segregant analysis (BSA) used for QTL ma...Figure 4.2 Steps involved in MutMap approach used to map the QTLs of target ...Figure 4.3 Steps involved in the QTL‐seq approach used to map the QTLs of th...Figure 4.4 Steps involved in bulked segregant RNA sequencing (BSR‐Seq) used ...Figure 4.5 Steps involved in Indel sequencing used to map the QTLs of the ta...Figure 4.6 Schematic representation of different types of biparental mapping...Figure 4.7 Genotyping of segregating population using KASPar assay.Figure 4.8 Genotyping of segregating population using Sequenom MassARRAY sys...
5 Chapter 5Figure 5.1 Methodology to conduct GWAS in crops. It can be divided into thre...Figure 5.2 (a) The figure illustrating the traits for which genome‐wide asso...
6 Chapter 6Figure 6.1 DNA extraction from seed endosperm. * Figure 6.2 Seed DNA‐based genotyping‐by‐sequencing using laser microdissecti...
7 Chapter 7Figure 7.1 Overview of estimate marker effects in order to get a genomic est...Figure 7.2 The methodology involved in marker‐assisted section (MAS) and gen...
8 Chapter 8Figure 8.1 Evolution of next‐generation sequencing.Figure 8.2 Sequencing and assembly of DNA.Figure 8.3 The workflow showing the steps involved in NGS data analysis.
9 Chapter 10Figure 10.1 World soybean production and productivity in 2019–2020. (a) Prod...Figure 10.2 World soybean oil production and soymeal export in the year 2019...Figure 10.3 Various pipelines and steps are involved in analyzing GBS data. ...Figure 10.4 Schematic representations of steps involved in association mappi...Figure 10.5 General steps involved in the GBS protocol for plant breeding....Figure 10.6 Diagrammatic representation of application of genotyping by sequ...
10 Chapter 11Figure 11.2 Name of the nine intra‐specific and four inter‐specific datasets...Figure 11.1 Integrated genomics and breeding approaches for cotton improveme...
11 Chapter 12Figure 12.1 Schematic representation of the important characteristics of mil...Figure 12.2 Applications of whole‐genome sequence (WGS) of millets.Figure 12.3 General steps involved in genomic selection.
12 Chapter 13Figure 13.1 Depicting the genomics and phenomics for the exploitation of pig...
13 Chapter 14Figure 14.1 GBS adapters, PCR and sequencing primers. (a) Sequences of doubl...Figure 14.2 Steps in GBS library construction. Note: Up to 96 DNA samples ca...Figure 14.3 Schematic representation of genomic selection processes from tra...
14 Chapter 15Figure 15.1 GBS data of seven barley chromosomes 1H–7H showing genetic diver...Figure 15.2 Illustration to depict that the simplex markers show similar mod...Figure 15.3 Diagrammatic overview of UGbs‐Flex Pipeline developing GBS refer...
15 Chapter 16Figure 16.1 Genomic distribution of single‐nucleotide polymorphism (SNPs) ma...
Guide
6 Preface
9 Index
10 WILEY END USER LICENSE AGREEMENT
Pages
1 iii
2 iv
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