Genomic and Epigenomic Biomarkers of Toxicology and Disease. Группа авторов
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The discovery of new molecular biomarkers overcomes the drawbacks, thanks to the intimate association of these se biomarkers with cancer-related genetic alterations. The proteins on the surfaces of exosomes are potential cancer biomarkers that can allow early tumor diagnosis (Table 3.2). Glypican-1 (GPC1) (+) exosomes could distinguish healthy subjects from patients with pancreatic cancer (Melo et al. 2015). The percentage of GPC1 (+) exosomes was markedly increased in plasma from patients with pancreatic cancer; however, they were decreased to normal levels after surgery. It was also reported that the exosome protein survivin-2B was a good biomarker for breast cancer diagnosis, and the level of TRIM3 protein in serum exosomes was decreased in gastric cancer patients (Khan et al. 2012; Fu et al. 2018).
Since exosomes are surrounded by a lipid bilayer membrane, they are not easily degraded even in those body fluids that contain many digestive enzymes. Therefore an EV-associated RNA is highly stable and makes an ideal noninvasive biomarker for cancer diagnosis. The most abundant type of RNA in exosomes is miRNA; consequently liquid biopsies using miRNAs in exosomes as cancer biomarkers have been developed in various cancer types (Table 3.3).
Increasing evidence has accumulated that EV-associated miRNAs may also prove clinically useful other than as cancer biomarkers—namely as biomarkers for non-cancer diseases. These diseases include pathogenic inflammation, infection, and chronic diseases. However, the disease-specific exosome cargo remains to be fully elucidated and validated.
Recently EV-associated miRNAs were identified as biomarkers for Alzheimer’s disease and Parkinson’s disease.
Table 3.3 Summary of exosomal proteins for early tumor diagnosis.
Type of cancer | Protein | Reference |
---|---|---|
Colorectal cancer | Copine III (CPNE3) | (Sun et al. 2019) |
CD147 | (Tian et al. 2018) | |
CD147 | (Yoshioka et al. 2014) | |
Gastric cancer | HER-2/neu, EMMPRIN, MAGE-1, C-MET | (Baran et al. 2010) |
TRIM3 | (Fu et al. 2018) | |
Lung adenocarcinoma | CD91, CD317, ITA2B | (Ueda et al. 2014) |
EGFR, KRAS, claudins and RAB-family proteins | (Clark et al. 2016) | |
CD151, CD171 and tetraspanin 8 | (Sandfeld-paulsen et al. 2016) | |
Melanoma | Caveolin | (Logozzi et al. 2009) |
Met | (Peinado et al. 2012) | |
Pancreatic ductal adenocarcinoma | GPC-1 | (Melo et al. 2015) |
Prostate cancer | PSA | (Mizutani et al. 2014) |
ephrinA2 | (Li et al. 2018) | |
Survivin | (Khan et al. 2012) | |
Renal cell carcinoma | MMP-9, DKP4, EMMPRIN, PODXL | (Raimondo et al. 2013) |
Table 3.3 Summary of exosomal miRNAs for early tumor diagnosis.
Type of cancer | Protein | Reference |
---|---|---|
Breast cancer | miR-101, miR-372, miR-373 | (Eichelser et al. 2014) |
Cervical squamous cell carcinoma | miR-221-3p | (Zhou et al. 2019) |
Colorectal carcinoma | miR-6803-5p | (Yan et al. 2018) |
Endometrial cancer | miR-200c-3p | (Srivastava et al. 2018) |
Glioblastoma multiforme | miR-320 and miR-574-3p | (Manterola et al. 2014) |
Hepatocellular carcinoma | miR-21 and miR-144 | (Pu et al. 2018) |
Lung cancer | miR139-5p, miR-200b-5p, miR-378a, and miR-379 | (Cazzoli et al. 2013) |
let-7g-5p, miR-24-3p, and miR-233-3p | (Rodriguez et al. 2014) | |
Ovarian cancer | miR-21, miR-141, miR-200a, miR-200c, miR203, miR-205, miR-214 | (Taylor and Gercel-taylor 2008) |
Pancreatic cancer | miR-1246, miR-3976, miR-4306, and miR-4644 | (Madhavan et al. 2015) |
miR-17-5p and miR21 | (Que et al. 2013) | |
Prostate cancer | miR-141 | (Li et al. 2016) |
Toxicology Biomarkers
Various chemical substances and drugs that are indispensable